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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9568400_9569179_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9568400 - 9569179

Intron Length:

780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGACCC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAA

U12 Branch Point Sequence:

CCTCTCTCAAGG

Flanking Amino Acid:

FFPRYMLKGEDPNSEAGMLR

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

72.5

37.3

Major BPS

73.4

0.58

0.9

75.3

29.7

Major PPT

77.7

0.62

0.7

69.1

31.4

Minor 5ss

33.2

-1.9

3.1

43.3

43.8

Minor BPS

45.7

-0.4

1.9

48.07

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016397

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017125

9561926 - 9591190

29265