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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9571031_9573495_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9571031 - 9573495

Intron Length:

2465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

ACCTCCTCACTC

Flanking Amino Acid:

AEANNSPLYVAILFAIAVFG

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.2

36.5

Major BPS

72.4

0.56

73.5

32.5

Major PPT

88.6

0.87

0.6

87.2

23.3

Minor 5ss

32.2

-2

3.1

37.6

42.2

Minor BPS

48.7

-0.1

1.8

56.36

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016397

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017125

9561926 - 9591190

29265