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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9576777_9578476_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9576777 - 9578476

Intron Length:

1700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTGGA

5'SS Class:

strong_major

3'SS Sequence:

GTGCTCTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

ACCTCCTCATCT

Flanking Amino Acid:

SSGFISSLHEIGNVVLIIFV

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

1.1

72.4

39.5

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

78.4

0.64

0.9

69.3

41.7

Minor 5ss

37.6

-1.4

3.2

49.9

46.3

Minor BPS

54.5

0.22

1.9

70.41

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016397

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017125

9561926 - 9591190

29265