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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9578615_9589028_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9578615 - 9589028

Intron Length:

10414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGCCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

GGGTACTGACTG

Flanking Amino Acid:

CSRGIFCNIKVFVLCHGLLQ

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

82.5

0.73

0.8

77.6

31.2

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

42.6

-0.7

1.9

42.85

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016397

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017125

9561926 - 9591190

29265