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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9628471_9631737_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9628471 - 9631737

Intron Length:

3267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

GACTTGTTAAGT

Flanking Amino Acid:

NNEFSSASDVWAFGVTLWEL

Intron Amino Acid Position:

481

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

27.9

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

44.9

-0.5

2.8

58.5

40.5

Minor BPS

47.5

-0.1

2.3

64.92

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002060

9627385 - 9666536

39152