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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9661997_9663247_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9661997 - 9663247

Intron Length:

1251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACAGA

5'SS Class:

strong_major

3'SS Sequence:

TGTATGCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TCAAACTTAATT

Flanking Amino Acid:

LQGEVPRTLSVFRVELSCTG

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

71.3

40.5

Major BPS

84.4

0.85

1.1

34.5

Major PPT

76.9

0.61

69.7

41.4

Minor 5ss

38.1

-1.3

49.1

46.7

Minor BPS

63.2

0.49

1.6

74.74

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002060

9627385 - 9666536

39152