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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9699926_9700670_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9699926 - 9700670

Intron Length:

745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTCCC

5'SS Class:

major

3'SS Sequence:

CGTTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAG

U12 Branch Point Sequence:

TTGTGTCTAAGG

Flanking Amino Acid:

QGTVAKLLAQSYEHQQEKEK

Intron Amino Acid Position:

542

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.1

63.5

41.4

Major BPS

52.8

0.07

1.7

63.6

42.5

Major PPT

85.7

0.8

80.7

31.4

Minor 5ss

36.8

-1.5

2.9

42.7

37.7

Minor BPS

44.3

-0.5

2.3

55.2

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002613

9698336 - 9704682

6347