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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9717003_9719858_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9717003 - 9719858

Intron Length:

2856

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCGAG

5'SS Class:

major

3'SS Sequence:

GTTTTTTCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCAAAA

U12 Branch Point Sequence:

GCTTGCAAAACA

Flanking Amino Acid:

PPPPRKRPLHSAQPPLEDPD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.3

63.2

43.4

Major BPS

52.9

0.07

1.1

59.3

35.9

Major PPT

0.81

0.7

84.9

29.9

Minor 5ss

31.1

-2.2

3.2

37.8

47.1

Minor BPS

45.6

-0.3

2.3

60.7

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003189

9716881 - 9736992

20112