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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9745305_9745464_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9745305 - 9745464

Intron Length:

160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTCCT

5'SS Class:

major

3'SS Sequence:

GCGCGCGGGCTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGTAAC

U12 Branch Point Sequence:

CGTGTAACAGCG

Flanking Amino Acid:

QDTGTKITISPLQDLTIYNP

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.45

1.3

66.6

44.7

Major BPS

56.8

0.17

1.4

61.4

43.2

Major PPT

45.8

-0.2

1.1

30.8

Minor 5ss

38.7

-1.3

56.4

40.7

Minor BPS

32.8

-1.4

1.9

34.07

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044601

9741060 - 9754607

13548

ENSAPLT00000003334

9741060 - 9754607

13548