Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_9752190_9754585_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9752190 - 9754585

Intron Length:

2396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCTAAAA

5'SS Class:

major

3'SS Sequence:

GTGCCTTCTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGGGAA

U12 Branch Point Sequence:

GGCTCGGGAAGC

Flanking Amino Acid:

EYRSKVEGLTILLPESL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

34.8

Major BPS

43.9

-0.3

1.4

42.3

Major PPT

63.4

0.3

1.1

60.3

40.7

Minor 5ss

26.3

-2.7

2.9

31.3

42.4

Minor BPS

35.1

-1.1

2.6

44.25

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044601

9741060 - 9754607

13548

ENSAPLT00000003334

9741060 - 9754607

13548