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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9770081_9770938_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9770081 - 9770938

Intron Length:

858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTGAGTAGT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

AATTGTATATAT

Flanking Amino Acid:

SRSRSRSYSPRRY*

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.3

70.5

41.3

Major BPS

71.4

0.53

67.3

39.3

Major PPT

100

1.12

0.4

100

Minor 5ss

33.5

-1.9

2.8

38.4

Minor BPS

-0.5

2.1

61.76

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027160

9769666 - 9790819

21154

ENSAPLT00000004031

9769666 - 9790819

21154