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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9771796_9775407_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9771796 - 9775407

Intron Length:

3612

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTATTCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATTTTTAAAATT

Flanking Amino Acid:

DDRDYYSRSYRGGGGGGGGG

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

70.9

36.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

82.4

0.73

0.8

77.4

35.8

Minor 5ss

24.6

-2.9

28.8

43.6

Minor BPS

50.3

0.09

1.9

74.24

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004031

9769666 - 9790819

21154

ENSAPLT00000027160

9769666 - 9790819

21154