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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9793642_9794024_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9793642 - 9794024

Intron Length:

383

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTGCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TGCCTCTTATTG

Flanking Amino Acid:

LNCWGSHLTDISICRDLPNV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

80.9

31.3

Major BPS

79.1

0.72

69.3

38.4

Major PPT

75.8

0.58

0.9

68.8

37.1

Minor 5ss

39.4

-1.2

2.7

51.9

37.5

Minor BPS

49.4

-0.1

1.7

52.8

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004295

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004407

9792911 - 9798687

5777