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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9796497_9797612_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9796497 - 9797612

Intron Length:

1116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTATC

5'SS Class:

major

3'SS Sequence:

CTCGTCCCGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

GTTTGTATAAAG

Flanking Amino Acid:

RATDCSRKKRNNVLNAILLL

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

35.1

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

66.3

0.37

35.3

Minor 5ss

36.1

-1.6

2.8

42.3

38.4

Minor BPS

46.6

-0.3

2.1

58.3

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004295

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029525

9792742 - 9798687

5946

ENSAPLT00000004407

9792911 - 9798687

5777