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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9801588_9801666_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9801588 - 9801666

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGCGG

5'SS Class:

major

3'SS Sequence:

TCTTTGCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

TTTCTTTGCACC

Flanking Amino Acid:

RINVLGHLQQGGAPTPFDRN

Intron Amino Acid Position:

685

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.8

0.37

1.2

48.2

47.5

Major BPS

67.6

0.44

1.2

Major PPT

73.7

0.53

0.9

65.9

Minor 5ss

29.1

-2.4

3.4

39.2

Minor BPS

49.3

-0

1.9

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017422

9800042 - 9805888

5847

ENSAPLT00000004540

9800042 - 9806543

6502

ENSAPLT00000042720

9800042 - 9806015

5974