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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9801930_9802073_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9801930 - 9802073

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATGTAG

U12 Branch Point Sequence:

GATGTAGGAGGT

Flanking Amino Acid:

EDPFTIHDLKANVEHLTDKM

Intron Amino Acid Position:

627

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

72.2

39.5

Major BPS

-0.6

1.7

35.1

43.5

Major PPT

79.1

0.65

0.9

73.2

37.2

Minor 5ss

34.3

-1.8

2.9

44.2

Minor BPS

29.5

-1.4

2.1

43.33

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042720

9800042 - 9806015

5974

ENSAPLT00000017422

9800042 - 9805888

5847

ENSAPLT00000004540

9800042 - 9806543

6502