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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9802477_9802646_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9802477 - 9802646

Intron Length:

170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGGGGA

5'SS Class:

major

3'SS Sequence:

GTGCCCATGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAT

U12 Branch Point Sequence:

GGTTTGGGACCC

Flanking Amino Acid:

QALLVIGGFEAYEGVLQLVE

Intron Amino Acid Position:

521

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

60.3

40.6

Major BPS

57.1

0.18

1.4

66.4

42.2

Major PPT

60.5

0.24

1.1

54.9

40.1

Minor 5ss

22.1

-3.2

3.4

43.5

Minor BPS

-1.1

2.5

47.91

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042720

9800042 - 9806015

5974

ENSAPLT00000017422

9800042 - 9805888

5847

ENSAPLT00000004540

9800042 - 9806543

6502