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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9803133_9803243_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9803133 - 9803243

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

ACTGTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

TGTGCCACCACT

Flanking Amino Acid:

LAHQKPAQEKSPFSLAILNV

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

38.2

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

69.7

0.44

0.9

62.5

33.9

Minor 5ss

28.6

-2.5

3.5

36.8

47.7

Minor BPS

45.4

-0.2

2.3

70.09

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042720

9800042 - 9806015

5974

ENSAPLT00000017422

9800042 - 9805888

5847

ENSAPLT00000004540

9800042 - 9806543

6502