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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9803308_9803408_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9803308 - 9803408

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

GTTGTCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAC

U12 Branch Point Sequence:

GGGCTCTCCACT

Flanking Amino Acid:

RFDEAIQLRGRSFENNWNIY

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

54.8

0.12

1.3

66.4

39.9

Major PPT

76.1

0.59

0.9

69.7

36.7

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

-0.3

1.9

58.99

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017422

9800042 - 9805888

5847

ENSAPLT00000004540

9800042 - 9806543

6502

ENSAPLT00000042720

9800042 - 9806015

5974