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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9804392_9804524_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9804392 - 9804524

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

CACGCCACGCCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAC

U12 Branch Point Sequence:

TTTTCCTTCCCC

Flanking Amino Acid:

EDMMCERLGETRSRGSRLNI

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

49.9

-0

1.3

60.3

37.5

Major PPT

0.07

43.6

37.2

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

48.6

-0.1

3.6

82.21

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042720

9800042 - 9806015

5974

ENSAPLT00000017422

9800042 - 9805888

5847

ENSAPLT00000004540

9800042 - 9806543

6502