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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9804765_9804881_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9804765 - 9804881

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCCT

U12 Branch Point Sequence:

TCTTCCTCCCTT

Flanking Amino Acid:

VIDAITTTAQSHQRTFVLEV

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

37.5

-0.7

4.3

79.6

35.6

Major PPT

79.7

0.67

0.8

31.8

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

40.1

-0.6

3.6

71.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017422

9800042 - 9805888

5847

ENSAPLT00000004540

9800042 - 9806543

6502

ENSAPLT00000042720

9800042 - 9806015

5974