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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9805342_9805454_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9805342 - 9805454

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCCTC

5'SS Class:

strong_major

3'SS Sequence:

ACATCCCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCACAT

U12 Branch Point Sequence:

CTCCCCACATCC

Flanking Amino Acid:

WLSVSNIIQLGGTVIGSARC

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

68.8

42.2

Major BPS

52.8

0.07

1.1

60.5

36.2

Major PPT

60.9

0.25

55.3

35.5

Minor 5ss

42.6

-0.8

3.1

56.9

41.9

Minor BPS

42.9

-0.5

53.03

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042720

9800042 - 9806015

5974

ENSAPLT00000017422

9800042 - 9805888

5847

ENSAPLT00000004540

9800042 - 9806543

6502