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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9807326_9807433_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9807326 - 9807433

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCCG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCCGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

CTGTGGTGACCC

Flanking Amino Acid:

GALGCGAQGTAPLAFTMLQW

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

44.2

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

70.6

0.46

66.4

35.7

Minor 5ss

31.1

-2.2

3.2

39.3

46.1

Minor BPS

38.2

-0.9

2.5

50.23

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005448

9805879 - 9808293

2415