Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_9819736_9821488_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9819736 - 9821488

Intron Length:

1753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGTATG

5'SS Class:

major

3'SS Sequence:

CTTTCTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAA

U12 Branch Point Sequence:

GCTCCTTTAAAC

Flanking Amino Acid:

DGMEYPFIGEGEPHVDGEPG

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.3

74.4

41.9

Major BPS

0.7

0.9

79.6

29.1

Major PPT

87.5

0.84

0.7

25.4

Minor 5ss

40.8

-1

2.6

51.1

45.4

Minor BPS

62.4

0.37

1.4

65.89

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005491

9814329 - 9826930

12602