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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9826717_9826853_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9826717 - 9826853

Intron Length:

137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

TGTGTCTCCCCG

Flanking Amino Acid:

LLCLCGEAAAGRDFYKILGV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

71.9

0.49

0.9

64.9

30.7

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

32.4

-1.4

3.5

47.31

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005491

9814329 - 9826930

12602