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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9827480_9827571_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9827480 - 9827571

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCACGGCCG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

CCCCGTGTCATG

Flanking Amino Acid:

AEELERERSKLSVDTLQFLL

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

64.8

40.9

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

75.5

0.57

0.7

69.5

24.3

Minor 5ss

19.7

-3.5

3.9

30.3

42.9

Minor BPS

30.9

-1.6

2.2

26.64

37.2

Associated Gene:

Gene:

TBCCD1

Ensembl Gene ID:

ENSAPLG00000005621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035757

9827012 - 9835469

8458