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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9827716_9828743_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9827716 - 9828743

Intron Length:

1028

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

GGCTCCTCATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

GGCTCCTCATCA

Flanking Amino Acid:

PAGKGAGQSKKRLIIAEGLE

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

65.8

0.36

38.3

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

50.9

0.02

1.9

61.41

44.2

Associated Gene:

Gene:

TBCCD1

Ensembl Gene ID:

ENSAPLG00000005621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026746

9826194 - 9831513

5320

ENSAPLT00000005811

9826194 - 9834361

8168