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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9827716_9829148_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9827716 - 9829148

Intron Length:

1433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTCCCTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

TTCACCTCACTC

Flanking Amino Acid:

PAGKGAGQSKNWNDQDHLAF

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

64.8

0.33

68.1

32.5

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

49.6

-0

1.9

63.08

42.8

Associated Gene:

Gene:

TBCCD1

Ensembl Gene ID:

ENSAPLG00000005621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035757

9827012 - 9835469

8458