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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9828804_9829148_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9828804 - 9829148

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGACCT

5'SS Class:

major

3'SS Sequence:

TCTGCTCCCTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

TTCACCTCACTC

Flanking Amino Acid:

QMQRFSSRAANWNDQDHLAF

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

62.4

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

64.8

0.33

68.1

32.5

Minor 5ss

37.5

-1.4

3.3

59.9

43.9

Minor BPS

49.6

-0

1.9

63.08

42.8

Associated Gene:

Gene:

TBCCD1

Ensembl Gene ID:

ENSAPLG00000005621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026746

9826194 - 9831513

5320

ENSAPLT00000005811

9826194 - 9834361

8168