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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9830478_9830625_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9830478 - 9830625

Intron Length:

148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TTCCTGCTCACT

Flanking Amino Acid:

ESFIYLLSPLRSVTIEKCRN

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.2

37.4

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

85.1

0.79

0.8

80.1

31.9

Minor 5ss

38.8

-1.3

2.9

46.2

Minor BPS

41.1

-0.6

2.5

65.17

45.4

Associated Gene:

Gene:

TBCCD1

Ensembl Gene ID:

ENSAPLG00000005621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026746

9826194 - 9831513

5320

ENSAPLT00000005811

9826194 - 9834361

8168

ENSAPLT00000035757

9827012 - 9835469

8458