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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9831124_9831500_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9831124 - 9831500

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTTCTGCTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGGTAC

U12 Branch Point Sequence:

GTCTCCTTGCTG

Flanking Amino Acid:

QKMVKEACLSNAAC*

Intron Amino Acid Position:

571

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.1

31.2

Major BPS

42.6

-0.4

1.5

34.8

43.5

Major PPT

79.1

0.66

0.9

69.5

41.7

Minor 5ss

30.2

-2.3

3.1

36.2

34.2

Minor BPS

43.8

-0.6

3.5

58.77

43.6

Associated Gene:

Gene:

TBCCD1

Ensembl Gene ID:

ENSAPLG00000005621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026746

9826194 - 9831513

5320