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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9831124_9834197_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9831124 - 9834197

Intron Length:

3074

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

CCTTGCTGATCA

Flanking Amino Acid:

QKMVKEACLSKDQRKQFQML

Intron Amino Acid Position:

571

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.1

31.2

Major BPS

0.62

1.4

85.7

34.9

Major PPT

82.1

0.72

0.9

76.3

37.7

Minor 5ss

30.2

-2.3

3.1

36.2

34.2

Minor BPS

46.7

-0.2

2.1

59.61

46.3

Associated Gene:

Gene:

TBCCD1

Ensembl Gene ID:

ENSAPLG00000005621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035757

9827012 - 9835469

8458

ENSAPLT00000005811

9826194 - 9834361

8168