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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9840718_9841932_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9840718 - 9841932

Intron Length:

1215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

TTGTTTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACAAT

U12 Branch Point Sequence:

AACACCTTACAA

Flanking Amino Acid:

RLGSCRAVQIPSGGRGHIQV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

70.9

39.3

Major BPS

65.2

0.38

1.3

73.4

38.5

Major PPT

88.5

0.87

0.8

81.2

36.5

Minor 5ss

38.9

-1.3

3.4

55.1

43.4

Minor BPS

49.2

-0

1.8

57.19

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006012

9837006 - 9842205

5200