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Intron Name: Anas_platyrhynchos_platyrhynchos_9_9937513_9942327_F

Intron Information:

Intron Rank:

139699

Intron Class:

major

Intron Phase:

Intron Coordinates:

9937513 - 9942327

Intron Length:

4815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

GTCATTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTCAT

U12 Branch Point Sequence:

TGCTCCTGAGAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

76.9

33.7

Major BPS

0.67

1.1

77.7

37.1

Major PPT

81.2

0.7

0.9

72.6

42.2

Minor 5ss

31.3

-2.1

38.6

46.4

Minor BPS

52.1

0.14

1.8

71.39

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042121

9936811 - 9942604

5794