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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000232.1_103839_122812_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103839 - 122812

Intron Length:

18974

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTACGTAAA

5'SS Class:

major

3'SS Sequence:

GACTTCCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCCTTTCTCATT

Flanking Amino Acid:

AKPGVIDAKGDIPGLGDDGY

Intron Amino Acid Position:

554

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

1.1

74.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

68.5

0.42

61.9

39.6

Minor 5ss

33.5

-1.9

2.9

33.2

Minor BPS

45.4

-0.2

62.82

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003730

Chromosome:

PEDO01000232.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025640

80714 - 731286

650573

ENSAPLT00000041688

44591 - 730946

686356

ENSAPLT00000003813

81770 - 470169

388400

ENSAPLT00000038000

80714 - 741600

660887

ENSAPLT00000028568

81770 - 731286

649517

ENSAPLT00000026832

80714 - 841857

761144

ENSAPLT00000047181

81770 - 841857

760088