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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000232.1_1108988_1109591_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1108988 - 1109591

Intron Length:

604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACTT

5'SS Class:

strong_major

3'SS Sequence:

GTCTGTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

TGACAGTGAACT

Flanking Amino Acid:

EVFVREPLFAGELNCEVCAV

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

77.9

36.7

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

79.5

0.66

0.9

72.9

37.4

Minor 5ss

37.2

-1.4

3.4

56.5

47.6

Minor BPS

44.9

-0.3

2.3

65.75

43.6

Associated Gene:

Gene:

TMEM126A

Ensembl Gene ID:

ENSAPLG00000003578

Chromosome:

PEDO01000232.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003685

1104677 - 1110300

5624