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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000232.1_175061_288296_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175061 - 288296

Intron Length:

113236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTAACCTCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

CTTTTTTTAACC

Flanking Amino Acid:

VTIIAQYQPEEYARFEAKIH

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

74.1

38.3

Major BPS

87.3

0.93

0.8

36.5

Major PPT

69.1

0.43

0.8

66.8

35.1

Minor 5ss

38.3

-1.3

2.8

40.3

45.6

Minor BPS

78.8

0.88

1.1

81.25

33.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003730

Chromosome:

PEDO01000232.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025640

80714 - 731286

650573

ENSAPLT00000041688

44591 - 730946

686356

ENSAPLT00000003813

81770 - 470169

388400

ENSAPLT00000038000

80714 - 741600

660887

ENSAPLT00000028568

81770 - 731286

649517

ENSAPLT00000026832

80714 - 841857

761144

ENSAPLT00000047181

81770 - 841857

760088