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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000232.1_304288_315136_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

304288 - 315136

Intron Length:

10849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTGTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TGTTTCTGTACA

Flanking Amino Acid:

VSLQRTISVEGEPRKIILHK

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

68.7

39.1

Major BPS

84.7

0.86

74.3

40.7

Major PPT

81.3

0.71

0.9

76.3

37.8

Minor 5ss

36.9

-1.5

39.1

46.1

Minor BPS

58.3

0.26

1.8

72.65

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003730

Chromosome:

PEDO01000232.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025640

80714 - 731286

650573

ENSAPLT00000041688

44591 - 730946

686356

ENSAPLT00000003813

81770 - 470169

388400

ENSAPLT00000038000

80714 - 741600

660887

ENSAPLT00000028568

81770 - 731286

649517

ENSAPLT00000026832

80714 - 841857

761144

ENSAPLT00000047181

81770 - 841857

760088