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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000232.1_315206_342231_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

315206 - 342231

Intron Length:

27026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGCAT

5'SS Class:

major

3'SS Sequence:

TTTGGTCATACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

TTTTCTCTATTC

Flanking Amino Acid:

VGLLPDSEITSHSQHSTATR

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

62.6

43.3

Major BPS

74.7

0.61

65.9

40.9

Major PPT

76.1

0.59

69.6

40.8

Minor 5ss

31.4

-2.1

3.6

47.4

Minor BPS

57.5

0.21

1.9

74.69

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003730

Chromosome:

PEDO01000232.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025640

80714 - 731286

650573

ENSAPLT00000041688

44591 - 730946

686356

ENSAPLT00000003813

81770 - 470169

388400

ENSAPLT00000038000

80714 - 741600

660887

ENSAPLT00000028568

81770 - 731286

649517

ENSAPLT00000026832

80714 - 841857

761144