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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000232.1_361398_372007_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

361398 - 372007

Intron Length:

10610

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

CTCATCCTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TATTTCTCATCC

Flanking Amino Acid:

RLQVGDRLLMVNNYSLEEVT

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.93

0.8

83.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

68.7

0.42

71.5

33.2

Minor 5ss

39.5

-1.2

2.8

48.4

41.7

Minor BPS

58.2

0.24

1.8

71.62

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003730

Chromosome:

PEDO01000232.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025640

80714 - 731286

650573

ENSAPLT00000041688

44591 - 730946

686356

ENSAPLT00000003813

81770 - 470169

388400

ENSAPLT00000038000

80714 - 741600

660887

ENSAPLT00000028568

81770 - 731286

649517

ENSAPLT00000026832

80714 - 841857

761144

ENSAPLT00000047181

81770 - 841857

760088