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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000232.1_372145_398060_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

372145 - 398060

Intron Length:

25916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATATG

5'SS Class:

strong_major

3'SS Sequence:

ATATCTTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTCATATCT

Flanking Amino Acid:

VEIKLFKGPKGLGFSIAGGV

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

84.2

33.9

Major BPS

100

1.24

0.5

100

Major PPT

79.1

0.65

0.9

70.5

40.4

Minor 5ss

38.7

-1.3

2.9

50.6

45.9

Minor BPS

0.55

1.9

88.58

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003730

Chromosome:

PEDO01000232.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025640

80714 - 731286

650573

ENSAPLT00000041688

44591 - 730946

686356

ENSAPLT00000003813

81770 - 470169

388400

ENSAPLT00000038000

80714 - 741600

660887

ENSAPLT00000028568

81770 - 731286

649517

ENSAPLT00000026832

80714 - 841857

761144

ENSAPLT00000047181

81770 - 841857

760088