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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000232.1_419865_467914_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

419865 - 467914

Intron Length:

48050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTACTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

TTTTCTTTACTT

Flanking Amino Acid:

YEFEEITLERGNSGLGFSIA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

80.2

30.7

Major BPS

0.6

65.6

41.1

Major PPT

90.3

0.91

0.7

88.5

28.4

Minor 5ss

37.9

-1.4

2.9

40.8

45.4

Minor BPS

75.9

0.89

1.5

91.31

32.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003730

Chromosome:

PEDO01000232.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025640

80714 - 731286

650573

ENSAPLT00000041688

44591 - 730946

686356

ENSAPLT00000003813

81770 - 470169

388400

ENSAPLT00000038000

80714 - 741600

660887

ENSAPLT00000028568

81770 - 731286

649517

ENSAPLT00000026832

80714 - 841857

761144

ENSAPLT00000047181

81770 - 841857

760088