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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000232.1_44759_82924_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44759 - 82924

Intron Length:

38166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CGTTCTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

ACAATCTCAACT

Flanking Amino Acid:

LEQEFGEYFTALLFQRMQWK

Intron Amino Acid Position:

862

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

83.5

35.1

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

84.7

0.78

0.8

76.5

37.6

Minor 5ss

46.2

-0.4

2.8

67.2

43.9

Minor BPS

55.5

0.25

1.6

68.14

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003730

Chromosome:

PEDO01000232.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041688

44591 - 730946

686356