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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000232.1_631485_702606_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

631485 - 702606

Intron Length:

71122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTCTTTTTCT

Flanking Amino Acid:

FPEMEWTNAQKYRYQDEDVP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

80.3

26.9

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

86.6

0.82

0.6

81.5

30.5

Minor 5ss

28.6

-2.5

3.4

37.8

Minor BPS

48.1

-0

3.6

87.77

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003730

Chromosome:

PEDO01000232.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026832

80714 - 841857

761144

ENSAPLT00000025640

80714 - 731286

650573

ENSAPLT00000047181

81770 - 841857

760088

ENSAPLT00000041688

44591 - 730946

686356

ENSAPLT00000028568

81770 - 731286

649517