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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000232.1_83017_88543_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83017 - 88543

Intron Length:

5527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

AGAATCTAAACT

Flanking Amino Acid:

FIKPKSWEPLMEMNKRLTEE

Intron Amino Acid Position:

714

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

80.3

0.68

0.8

72.8

37.5

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

0.2

1.7

68.63

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003730

Chromosome:

PEDO01000232.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025640

80714 - 731286

650573

ENSAPLT00000041688

44591 - 730946

686356

ENSAPLT00000003813

81770 - 470169

388400

ENSAPLT00000038000

80714 - 741600

660887

ENSAPLT00000028568

81770 - 731286

649517

ENSAPLT00000026832

80714 - 841857

761144

ENSAPLT00000047181

81770 - 841857

760088