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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000232.1_88654_89336_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88654 - 89336

Intron Length:

683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTTTG

5'SS Class:

major

3'SS Sequence:

CTGTTTCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

ACATCCTCATCT

Flanking Amino Acid:

VQSVRFVAERGKHCILDVSG

Intron Amino Acid Position:

678

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

69.7

43.7

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

74.4

0.55

0.9

70.1

35.3

Minor 5ss

-0.9

3.1

47.2

Minor BPS

55.6

0.25

1.8

71.75

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003730

Chromosome:

PEDO01000232.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025640

80714 - 731286

650573

ENSAPLT00000041688

44591 - 730946

686356

ENSAPLT00000003813

81770 - 470169

388400

ENSAPLT00000038000

80714 - 741600

660887

ENSAPLT00000028568

81770 - 731286

649517

ENSAPLT00000026832

80714 - 841857

761144

ENSAPLT00000047181

81770 - 841857

760088