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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000232.1_90610_91137_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

90610 - 91137

Intron Length:

528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTGCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATCAA

U12 Branch Point Sequence:

ACATCATCAAAA

Flanking Amino Acid:

LSYEPVTRQEINYTRPVIIL

Intron Amino Acid Position:

586

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

85.1

25.6

Major BPS

66.5

0.41

1.1

68.2

37.5

Major PPT

0.72

76.9

42.1

Minor 5ss

46.5

-0.4

2.7

61.9

36.7

Minor BPS

47.8

-0.1

1.9

58.01

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003730

Chromosome:

PEDO01000232.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025640

80714 - 731286

650573

ENSAPLT00000041688

44591 - 730946

686356

ENSAPLT00000003813

81770 - 470169

388400

ENSAPLT00000038000

80714 - 741600

660887

ENSAPLT00000028568

81770 - 731286

649517

ENSAPLT00000026832

80714 - 841857

761144

ENSAPLT00000047181

81770 - 841857

760088