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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000233.1_105747_106559_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

105747 - 106559

Intron Length:

813

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTAAAGTTC

5'SS Class:

major

3'SS Sequence:

GGGGAGGAAGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTCCTCCAAAA

Flanking Amino Acid:

EPLLERVAEVTVSSICQWGN

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.9

0.33

1.1

62.7

36.6

Major BPS

0.62

1.4

85.7

34.9

Major PPT

40.7

-0.5

1.1

23.6

35.4

Minor 5ss

42.5

-0.8

3.4

59.9

40.5

Minor BPS

48.3

-0.1

1.9

67.59

38.1

Associated Gene:

Gene:

GALNT2

Ensembl Gene ID:

ENSAPLG00000002130

Chromosome:

PEDO01000233.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002298

79681 - 119596

39916