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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000233.1_106686_109614_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106686 - 109614

Intron Length:

2929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTACTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

TTTTCTTTACTT

Flanking Amino Acid:

VRVLRNDRREGLMRSRVRGA

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.2

39.3

Major BPS

0.6

65.6

41.1

Major PPT

86.4

0.82

0.8

80.7

30.9

Minor 5ss

-0.3

3.1

66.9

44.7

Minor BPS

75.9

0.89

1.5

91.31

32.6

Associated Gene:

Gene:

GALNT2

Ensembl Gene ID:

ENSAPLG00000002130

Chromosome:

PEDO01000233.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002298

79681 - 119596

39916