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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000233.1_25534_25839_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25534 - 25839

Intron Length:

306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTTAGCTGC

5'SS Class:

weak_major

3'SS Sequence:

ACTTTTGTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTTAT

U12 Branch Point Sequence:

CCTTTCCTACTT

Flanking Amino Acid:

SVRQWIHFQRSPTRKMPLTA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.1

0.14

1.3

49.9

42.2

Major BPS

67.4

0.43

1.1

57.4

41.4

Major PPT

72.9

0.51

0.9

65.6

40.4

Minor 5ss

41.8

-0.9

2.8

48.4

41.6

Minor BPS

48.5

-0

67.26

44.4

Associated Gene:

Gene:

PGBD5

Ensembl Gene ID:

ENSAPLG00000001338

Chromosome:

PEDO01000233.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001358

25497 - 59538

34042